Q27082/406-534 SKSYSKLIQAESYFDSSKVQLEDTSDVGGG----------------------KNVKCDNE CONSENSUS/80% ..s..thhpu-.at...t..hphht.st.........................slshhps CONSENSUS/65% shss.stlpAEpasttsusthchhstsss........................slGhhps CONSENSUS/50% spsshspl-AEsYssssusss-ssssssGu......................pslGaIss Q27082/406-534 GAWMAYKD--IDFPSSGNYRIEYRVASERAGG----KLSLDLNAG-----SIVLGMLDV- CONSENSUS/80% Gsahtap...lshs.sut.thpspsustssts.....hplphsu......s.hlush.l. CONSENSUS/65% GcWltapt..lchstsGshphpspVAstsusu.....lplclsus....sutllGsltV. CONSENSUS/50% GDWlsYss..lDFGpsGupslsA+VAossuuu.....l-lRLDSs....sGsllGolsV. Q27082/406-534 P--STGG--WQKWTTI--SHTVNVD-------SGTYNLGIYVQRAS-------WNINWIK CONSENSUS/80% ....oGs..hppa.ph..tttls..........uhpplhhh..s.........hsls.ht CONSENSUS/65% s..sTGu..apsapsl..pssls.s.......sGspclhhhhpss........hNlshhp CONSENSUS/50% P..sTGu..Wssapsl..ssslsss.......sGs+DlaLVFpGss......hhNlDaas Q27082/406-534 ITK CONSENSUS/80% hst CONSENSUS/65% Fsp CONSENSUS/50% Foc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |