5085.AFUA_2G00690_from_529_to_AVAVTFNE-----IAT-TTYGENVYIVGSISELG----NWDTSK------AVALSAS--- CONSENSUS/80% .h.lph...........s...p.lhlsGsh.tlG.....Wsstt......sh.ht..... CONSENSUS/65% pstVpFph......ss.sthtpplhlsGshspLG.....Wsspp......ul.Lp..... CONSENSUS/50% plsVsFplp.....sshTssspslhllGStspLG.....Wsssp......AlsLp..... 5085.AFUA_2G00690_from_529_to_-----KYTSSN------------------NLWYVSVT-LPAGT----------------- CONSENSUS/80% .......ttt.....................W.hpl.....t.................. CONSENSUS/65% .......sss.....................Wpssls...tst................. CONSENSUS/50% ......tssst...................hWpsolshhssss................. 5085.AFUA_2G00690_from_529_to_TFEYK----YIRKESDG------------SIVWESDP-NRSYTVPAACGVSTAT CONSENSUS/80% .hpa+....ahh....t...............aptt..pp.h....tst..... CONSENSUS/65% .lcaK....alhh..tt............shtWEsst.s+thhsstpst.thts CONSENSUS/50% .lEYK....Ylptpsss............sspWEsss.NRphssspssssstss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |