370438.PTH_2516_from_36_to_119GEEVTVLYNGLLGK-EGSGQVYLHYGYGGHDDWR-------NVTDVRMEKT-GWG----- CONSENSUS/80% spphplhYps..t..ts.tphhh+huh...ttWp.......t..sh.hptt...s..... CONSENSUS/65% upslolhYss..sp.sssspshlHhGh...ssWp.......slsshtMpcs.spu..... CONSENSUS/50% GcslTlaYsGhLup.suusslaLHhGass.ssWp.......slsDlsMc+s.s-G..... 370438.PTH_2516_from_36_to_119---WVSSVVMPEHEGRFNFCFRD----GANNWDN-NNGLNWSFEIH CONSENSUS/80% ...h.tsl.h..ps.phshsFps....st..aDN.Nss.sath.ht CONSENSUS/65% ...ahtslth.tpspplshsFps....sussWDN.Nsutsashpls CONSENSUS/50% ...apsTlsl.pcuspLsasF+D....uussWDN.NuGtNYsapls
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |