5141.NCU00472.1_from_391_to_490INIP-------------PADSEDPE-----VQQARAIFESF---SPEMKKALESGKLDEV CONSENSUS/80% h.hP.............st...DP...........plapph...s.phpcshcspslp.l CONSENSUS/65% h.hP.............su...DP...........clFcoL...PtchQcshcspclphl CONSENSUS/50% hpsP.............Gulp.DPs..........-VFESL...PcELQKuF-o+Dl-tL 5141.NCU00472.1_from_391_to_490NKVLGKMKVEEAEELVSKFGDAGVL-SLEEEIIDATTQEGQE----KWK---EIEAAKKH CONSENSUS/80% ppshuchs.pcAc.hhphh.-uGlh..l.t......t....................... CONSENSUS/65% pcshucMss--Achhlcphh-uGlh..lsst.cstpt.p.......t........tth.t CONSENSUS/50% QcVlu+McsEEAEaHlc+ClDSGLW..VPsuhcsssshcp.p....cth...p..pthcp 5141.NCU00472.1_from_391_to_490ADEPAGDPE CONSENSUS/80% ........t CONSENSUS/65% .t..p..sp CONSENSUS/50% tsppcpssc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |