Consensus terms for the CG-1 domain

3702.AT5G64220.2_from_18_to_136LLSEAQHRWLRPA------------EICEILR--NHQKFH--IASEPPNRPPSGSLFLFD
CONSENSUS/80%    h.pp.p.+W.ps.............EItthLh..sappap..lssps.sRPpsGShhlas
CONSENSUS/65%    l.pc.+pRW.pst............EIssILh..sac+ap..losps.sRPpSGSllLas
CONSENSUS/50%    LhpEh+aRWhTsE............EIAAILl..NF-KHs-WlTooPsTRPsSGSllLFN


3702.AT5G64220.2_from_18_to_136RKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSID-VLH-CYYAHGE--DNENFQRRCY
CONSENSUS/80%    RKhl+a.RpDGapW+K++DGKss+EsH.+LKVtuh..tlp.shYsHup....soFpRRsY
CONSENSUS/65%    RKhl+Y.R+DGasWKK+KDGKTs+EsH.+LKVtuh-.slp.shYsHup....PTFpRRCY
CONSENSUS/50%    RKKVKYaRKDGYsWKKKKDGKTsREDHhKLKVGGsE.sL+.uhYlHSu..IlPTFHRRCY


3702.AT5G64220.2_from_18_to_136WMLE---------------------QDLMHIVFVHYLEVK
CONSENSUS/80%    hh........................p..cIVLVHYLsV.
CONSENSUS/65%    Wh........................ppscIVLVHYLsV.
CONSENSUS/50%    WLLp.....................hQNPDIVLVHYLNVP

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T