349521.HCH_04791_from_52_to_201----------SELGVTWQVTDNLQDS------------YNSFLADLTIHNRGAADLE--- CONSENSUS/80% ..........ppLtlpaplhsNhsst............uts.hsplplhstht.s..... CONSENSUS/65% ..........ssLslpYpVlsNhsss....Ctt.tu-.upChhuplsLsstsshs..... CONSENSUS/50% ..........ssLsVsYcVlTNpsss...pCsphuA-.usCFpAcIoLsNssctsh.... 349521.HCH_04791_from_52_to_201----ASGWTIYFNFVRDVLA--VTPSDQ-FNVE-----HINGDFFKLTPAAGFTGLKAGE CONSENSUS/80% .....stsWtlYhpphc.l.t..h.stp.Fplp.....+lpGDLa+lpPsttFpGh.tst CONSENSUS/65% .....up-WsIYapphR.l.p..lpscp.Fpls.....HlpGDLa+lpPTspFpGhtsGp CONSENSUS/50% .....u+DWuIYFSslRslps..V-sDp.FsIo.....HlsGDLH+IsPTusFsGFsAGp 349521.HCH_04791_from_52_to_201SLKIQLKASFWAISKSDAPAGFYIVKNDGAG-------GQSVEAITD------------- CONSENSUS/80% thpl.hhsphWtl.coDhhPphYlsstsht........shlltu.p.h.s.......... CONSENSUS/65% phplshhuEhWpLtcoDhMPpaYlsusshp........PtlltS.psspD.......p.. CONSENSUS/50% slcIsFpuEaWQLoETDsMPNaYlsusctc........PslIcSTpsocD......hp.. 349521.HCH_04791_from_52_to_201-VTLGAQTTP-EQTQRFDG----DNMPLDT-AEV CONSENSUS/80% ..altshss...papR.ts....Dp...hs.st. CONSENSUS/65% .salpshoss..Qa+Rsps....Dp..hhT.spt CONSENSUS/50% .sYVssFTss.pQaKRocs....D+sshAT.ups
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |