Consensus terms for the CKS domain

7165.AGAP009442-PA_from_5_to_74DIYYSDKY--YDDEYEYRH-----VVL---------PKDIAKLVPKT-------------
CONSENSUS/80%    pl.YS.+a...DspapaRH.....VhL.........spth.phlspt.............
CONSENSUS/65%    pIhYSs+Y...D-paEYRH.....VhL.........Pcplh+hlPps.............
CONSENSUS/50%    pIhYSsKY..pDDcaEYRH.....VlL.........P+cls+llPps.............


7165.AGAP009442-PA_from_5_to_74------------HLMTENEWRA-------------IGVQQSRGWVHYMVHQP------EP
CONSENSUS/80%    ............hlhsEpEWRt.............lGlp.S.GW.Ha.hHtP......Es
CONSENSUS/65%    ............+LloEsEWRt.............LGlpQS.GW.HYhhHpP......EP
CONSENSUS/50%    ............+LLSEsEWRs.............LGIQQShGWpHYMlHcP......EP


7165.AGAP009442-PA_from_5_to_74HILLFRRPIT
CONSENSUS/80%    HlLlF+R.hs
CONSENSUS/65%    HILLFRRPhs
CONSENSUS/50%    HILLFRRPhs

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T