CLUS_BOVIN ------KELQEMSTEGSKYVNKEIKNALKEVKQIKTQIEQTNEERKLLLSSLEEAKKKKE CONSENSUS/80% pt.h.spELpphSstGSpYlscElpNAlptVKphKshhEpostE+psLLssLEEsKKKKE CONSENSUS/65% -ptlSDpELQEhSTpGS+YlNKEIcNAlpGVKQIKTLIEpTNcERKoLLuoLEEAKKKKE CONSENSUS/50% DpsVSDsELQEMSTpGSKYlNKEIKNALpGVKQIKTLIE+TNEERKSLLSoLEEAKKKKE CLUS_BOVIN DALNDTRDSENKLKASQGVCNETMTALWEECKPCLKQTCMKFYARVCRSGSGLVGHQLEE CONSENSUS/80% tALp.sp-sE.+Lct..tlCNETMhuLWEECKPCLKpTCM+hYu+sC+SGSGLVGpQLEE CONSENSUS/65% -ALsDT+DSEpKLKtpptVCNETMhALWEECKPCLKpTCMKFYARVCRSGSGLVG+QLEE CONSENSUS/50% DALNDTRDSEpKLKupQGVCNETMMALWEECKPCLKQTCMKFYARVCRSGSGLVG+QLEE CLUS_BOVIN FLNQSSPFYFWINGD--RIDSLMENDREQSHVMDVMEDSFTRASSIMDELFQDRFFLR-- CONSENSUS/80% FLNpSSPFhFWhNGD..RIDsLhEp-ppQsphh-.MpDpFsphoshh-pLFQDpF.hh.. CONSENSUS/65% FLNQSSPFYFWhNGD..RIDSLLEsDRQQo+sLDsMpDSFsRASuIhD-LFQDRFFsR.. CONSENSUS/50% FLNQSSPFYFWhNGD..RIDSLLENDRQQoHVLDlMQDSFsRASuIlDELFQDRFFsR..
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |