CELF59A6_3 NNLKIFKAYTIE----DWILFATQTGLFFTSISQP-------------RNPMRIAGPNSV CONSENSUS/80% .thph.t.h.ht.....hllhuoppGlahhshpp...............t...lht.p.. CONSENSUS/65% tshphspshsppt....hlLhuTppGlahhshsp..............ssh.plhtppt. CONSENSUS/50% sssphscslop-t....hLLlGT-sGLYsLslsc..............ussp+Lhs++sh CELF59A6_3 TSLEIMAEIKCVAMVA-NSSGQLAMIPLDSLIL--------------AMQSTQPSIRPEI CONSENSUS/80% .ph.hht..phlh.l..spp..lh.h.ls.l................th.stt...+t.h CONSENSUS/65% .ph.lhp..psLhhls.spp..lhhhsLsslh...............thtssphh.+cps CONSENSUS/50% pshtlhsttssLhhlu.G+p.pLtsasLssLhpp............psttsschlhR+ps CELF59A6_3 L-PEFEHVH---MIKYHQ--QNGQR--FLLISDDTHLHVRKYNATRDIFSQYAKFDV--- CONSENSUS/80% h...h.csp...hhhht...hp.....hhhhs.sh..pl.hh..h.psh.phh.hp.... CONSENSUS/65% h.sphscscG..shthth..spstp..hhhlssuhppslplh..hhcshppahhhc.... CONSENSUS/50% h.sclsDl+G..shphsl..scGpp..hlalssAhppoVpla.phhcPhp+Fhph+s... CELF59A6_3 --------------------PEPISFIESAP--SGIIFACDT--------FYYVALDHQT CONSENSUS/80% .........................hh..t....tlhhuspt.........hthh.h... CONSENSUS/65% ...................h.hhs.hh.ps...stlhlGsst........shphhthp.. CONSENSUS/50% .............hshhsshshhsslspsstthsplllGsss........shpslpacp. CELF59A6_3 ---------SSNVSARKLMSPNKNEF---------PISAQMINQ------NEVLLAYQNQ CONSENSUS/80% ............hshtph....h...s.......tsh.h..l........p.hhlsapp. CONSENSUS/65% ............sshpch.h..t.tts.......pshtlh.lpt......sphLlsapph CONSENSUS/50% ..........tslshpchSssstsppop......cslslstlsp......splLLsaccp CELF59A6_3 GIFVNLHG----EQSRNETIEWEKMPMEFIYTS-PFLYIVHDDSIEILEISETSD-RTVL CONSENSUS/80% shhls..G....pt.pt..l.at....thshht.s.lhhh.pp.lphhplppsp...t.h CONSENSUS/65% shhVNh.G....cpp+ss.lpasthspthuhhp.s.lhshtppulplhplpssph.hpsl CONSENSUS/50% ulaVNppG....Rco+ssplpW-ptPpshAahp.splhuaaccuIEI+slcoscl.spsl CELF59A6_3 AERALFECVNAHVIGR---QYEGVLISVSS CONSENSUS/80% h......s..h+hlt....ptp.lhht... CONSENSUS/65% hc.....spph+lLs....psctlhhpsps CONSENSUS/50% scc....spphRlLut...sscsIllsSps
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |