349161.Dred_1502_from_179_to_2SAFVRLAQRGALALPMLNVAVVISLKEE------------KVEWVRIVMAPVA------P CONSENSUS/80% tta..htph...shuhsssuh.h.hpt................thplshsuhu....... CONSENSUS/65% tsapphpcp...shuhVssAhhlphps..............htps+luhGGhu....... CONSENSUS/50% suYc+scRRtss-aAlVusAstlphcst............tlpssRlAhGGlus...... 349161.Dred_1502_from_179_to_2KPIRARMAEKVLQ-----------NASV--SEELIEEAARVAC---TEANPRNS---ALR CONSENSUS/80% hshth.tspthl............st......................t........... CONSENSUS/65% psh+sttsEthLh...........Gp....tthhthst.tht....t.s.s.s......t CONSENSUS/50% sPhRuppsEssLt...........Gp.hstssstptsttsttt...stsssss......c 349161.Dred_1502_from_179_to_2GSAEYRKEVL-EVLVKRALEQA CONSENSUS/80% .psta+htls...hhh+hh.th CONSENSUS/65% usstYRtpls.tshhh+hhhps CONSENSUS/50% uoscYRppLu.pslltRsltps
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |