Q9PTJ8/93-236 GKKCVVIDLDETLVHS--------------SFKPISNADFIVP----------------- CONSENSUS/80% t+hhLllDLDpTLlHs..............t......tt..................... CONSENSUS/65% p+hsLVLDLDcTLlHo..............p.t.ht.tp.hh.................. CONSENSUS/50% cKhsLVLDLD-TLlHS..............shpssssp-hhht................. Q9PTJ8/93-236 -VEIDG--TIHQVYVLKRPHVDEFLQRMG-ELFECVLFTASLAKYAD------------- CONSENSUS/80% ............hhhhhRPhlc.FLpphs.phaphhlaThu.t.Yup....... CONSENSUS/65% ..........hthhlhhRPhlcpFLcchu.cha-lhlaTtuhphYAp....... CONSENSUS/50% ..........hphaV+KRPaV-EFLcclu.chFElllFTuutctYAc....... Q9PTJ8/93-236 -------PVA----DLL--D-RW-GVFRARLFRESCVFHRGN-YVKD------------- CONSENSUS/80% ........lh....phl..D.pt.hhhtphh.Rpps...t.................... CONSENSUS/65% ........lh....chL..Dspp.hhhp+hlhRcpss.hpsp.h.h.............. CONSENSUS/50% .......sll....DhL..DPc+.tlhcRhLaR-cCsthcGp.ahKc............. Q9PTJ8/93-236 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ Q9PTJ8/93-236 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ Q9PTJ8/93-236 -----------------------LSRLGR----------ELSKVIIVDNSPASYIFHPEN CONSENSUS/80% .......................hphh.t..........s.ptslllDss.tsa.hp.pN CONSENSUS/65% .......................Lshlht..........-.ptllIlDsssssa.hpspN CONSENSUS/50% .......................Lsllsp..........DhupVlIlDsoPsuashaPcN Q9PTJ8/93-236 --AVPVQSWFDDMTDT CONSENSUS/80% ..hl.lt.a....tss CONSENSUS/65% ..hlslpsah.t.scs CONSENSUS/50% ..ulsIpsapssssDs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |