257314.LJ1184_from_423_to_543LLQ-DLSKPNEIHLITLLAAIAK-GINYHTLHQLL-HIHLVFLQKFNHILILLKKLRN-- CONSENSUS/80% l.t.tltpssspRlhhltpAhp..Ghohcplhpho.tID.aFL.phtpllphpptl.t.. CONSENSUS/65% lhp.pLppPsscRlahlucAh+t.Ghol-claclT.pID.WFLpplppllchEpplpp.. CONSENSUS/50% lcc.cLppPss-RlahlA-AhRp.Ghol--la-lT.+IDsWFLsplccIVchEccLcp.. 257314.LJ1184_from_423_to_543----------DELTA---DLMLKVKKNGFSNRLIAEITQRDEKS---------------- CONSENSUS/80% .............s....t.lhthKphGFoDttlAthht.sttt................ CONSENSUS/65% .........htthst...phLpphKphGFSDtplAplhshsptp................ CONSENSUS/50% .......tshsslst...-hL+cAK+hGFSDcpIAcLhussEsc................ 257314.LJ1184_from_423_to_543--------------IADL-CKKWSIK-PSYIEIDGTAGLIH-PNIQAVYSSY CONSENSUS/80% ..............lpth.R.thslh.PsaKhlDTsAuEF..s.TsYhYooY CONSENSUS/65% ..............lRph.Rpphslh.PlaKpVDTCAAEFt.utTsYhYSTY CONSENSUS/50% ..............VRph.RcchuIp.PVYKpVDTCAAEFs.ApTPYhYSTY
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |