5833.PF13_0168_from_84_to_147CL---KDY-TLPCP---------------NYWKR-RTDKYGKNV---------------- CONSENSUS/80% C.....sa.p..CP................tWh..hptt..................... CONSENSUS/65% Cp...csY.s..CP...............hsWh..hsssh.................... CONSENSUS/50% Cc...+-Y.spsCP...............hsWlp.hscst.................... 5833.PF13_0168_from_84_to_147------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 5833.PF13_0168_from_84_to_147---------------------------------------------------CIAN----- CONSENSUS/80% ...................................................Chss..... CONSENSUS/65% ...................................................Chss..... CONSENSUS/50% ...................................................ChuP..... 5833.PF13_0168_from_84_to_147----EEYNGF----CEQV----------------QIFDEFSEHE-KMSYESSCNVEWGCK CONSENSUS/80% ......Y.s.....Ctp.................h.h..hs... K..ht..Cph.W.C. CONSENSUS/65% ....psYpus....Cpp.................hpFpphsppp KcpapptCplpWPCh CONSENSUS/50% ....csYcGs....Cspp................hsFcshsppc KcsauppCclpWPCp 5833.PF13_0168_from_84_to_147G CONSENSUS/80% p CONSENSUS/65% s CONSENSUS/50% s
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |