243233.MCA0931_from_5_to_237LYMIEL--------RPDPAALIRFAQDQGLNTHQDQDLGYATHAWLKALCGELAPKPF-- CONSENSUS/80% halopl.l......t.t.t.hht..t.p..th..........HphlhphFsp..ttt... CONSENSUS/65% MaLS+lhL......s.pttthtt.ht.sshsh..........HphlhphFsspsspp.t. CONSENSUS/50% MYLS+lpL......sspspthpchls.ssYsh..........HchLhsLFPcssccspc. 243233.MCA0931_from_5_to_237------RLLQDGRNLRPPRLLGFSAHDGTRLTEHARAFASPLAAQ--------------- CONSENSUS/80% ......hLaR.-..............t..hhhl.Stt.P..................... CONSENSUS/65% ......hLaRh-............tssthhhhlhSpppPp.................... CONSENSUS/50% ......aLaRlEt...........ssussplLllSscpPchtth................ 243233.MCA0931_from_5_to_237VCSLADGIAFKP--MPES-WPNGRKLGFEVMACPI---------------SRLGRN---- CONSENSUS/80% ..t..t.hthc...h.st.httsp.htFpLpANPs......................... CONSENSUS/65% tpshhp.hph+s..hhsp.lptGpphtFcLpANPs......................... CONSENSUS/50% ssssss.lcsKs..ahsp.LpsGppLcF+LRANPlhth................h..... 243233.MCA0931_from_5_to_237----------EDDVYRRHLRDCD--ARAQS---PDSREMV--YRRWLT--RQ-------- CONSENSUS/80% ...................tt....pttph.....hhttt...htWLt..ppht...... CONSENSUS/65% ...........t...pht.tt....ppsct...hslhpps..thtWLt..c+spt..... CONSENSUS/50% ...........pstp+hptsssp..cpu++...ssltpps..ttsWLp..++upp..... 243233.MCA0931_from_5_to_237-------FGSAAT----------------------------LDDFSLDGFRYLRLLRKAR CONSENSUS/80% ........Ghp.................................h.htshtt.th.cttt CONSENSUS/65% .......hGFpl..............................tthplsshpphpht+tpp CONSENSUS/50% .......tGFpl.............................tsssslsuhcptphs+sss 243233.MCA0931_from_5_to_237GTRSG-------FLAPQALFRGTLSVRDGAGFGALLARGIGRHRAFGFGMLLLRP CONSENSUS/80% t...........hphttspapGhLtlpDsthhhttl.pGlG.u+uaGhGLh.lt. CONSENSUS/65% p...........lphssVsacGhLpVsDsshahpsLtpGIGpuKAaGCGLl.lt. CONSENSUS/50% cp..........lshusVsF-GsLpVTDPctFppuLspGIG+uKAFGCGLLoLuP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |