Consensus terms for the CSF2 domain

CSF2_BOVIN       APTRPPNTATRPWQHVDA-IKEALSLLNHSSDTDAVMNDT-EVVSEKFDSQEPTCLQTRL
CONSENSUS/80%    APsR.P.ssTpPWpHVpA.IpEAhpLLs...sThs...EpVEVlSp.Fs.pc.TClQTRL
CONSENSUS/65%    APsRsPoPsTpPWcHV-A.IpEALsLLNpupDTsA.MsEsVEVlSEhFDhQEPTClQTRL
CONSENSUS/50%    APTRSPSPVTRPWcHV-A.IKEALsLLNcSsDTAA.MNETVEVVSEMFDhQEPTCLQTRL


CSF2_BOVIN       KLYKNGLQGSLTSLMGSLTMMATHYEKHCPPTPETSCGTQFISFKNFKEDLKEFLFIIPF
CONSENSUS/80%    clacQGLRGshTpLpGsLsMhAsaYppaCPPT.ETsCtTQhhTatsFh-sLKsFLhsIPF
CONSENSUS/65%    cLYKQGLRGSLTKLKGsLTMhASHYcpHCPPTPETSCtTQlITFcSFK-sLKcFLhsIPF
CONSENSUS/50%    cLYKQGLRGSLTKLKGuLTMMASHYKQHCPPTPETSCETQlITFcSFKENLKDFLhlIPF


CSF2_BOVIN       DC
CONSENSUS/80%    -C
CONSENSUS/65%    DC
CONSENSUS/50%    DC

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T