5141.NCU06929.1_from_863_to_10TARTPAWN----------RDAGGSRTPAWN---DGSRTVNPYDGSRTPYGGATAYGGIGS CONSENSUS/80% su.TPshs..............supTPhhs.....ups...........s........su CONSENSUS/65% uupTPuas.............sGu+TPAas.....upos.........hssss..s.ssu CONSENSUS/50% GucTPuauu...........huGu+TPAaG.....u+Ts....u..shhusssstutuGu 5141.NCU06929.1_from_863_to_10RTPAWHS-GSRTPAP--------DSFGHGSKTPAWSAGSDSWG--SKTPGYGASAPTPGA CONSENSUS/80% tsssatt..utTss...............stTsshs.tt..hs..t.sss.s........ CONSENSUS/65% tTPuasu.sutTPshsut...........upTPuaussss.hs..p.sss.s.s...... CONSENSUS/50% pTPAasutuu+TPAauut.........ssusTPAaGususssstsspsuuoshuu..... 5141.NCU06929.1_from_863_to_10SG-DAWGYTPGASGGGNSSSAYDAPTPGGGLSAPTPGA-------------ALNAPTPGA CONSENSUS/80% ...........................st..ss.osh..............shsssssht CONSENSUS/65% ...........................uts.susTPuh............tsasssosus CONSENSUS/50% .........................ssGsssuAsTPuhh...........uuauusTPuu 5141.NCU06929.1_from_863_to_10Y--SAPTP--AA----------VSAPTP CONSENSUS/80% .....s....s.............usos CONSENSUS/65% ....ssss..st...........susoP CONSENSUS/50% s..ussssssusst.........suPTP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |