BMP1_HUMAN/1-1 CGETLQDST------GNFSSPEYPNGY------------------------SAHMHCVWR CONSENSUS/80% Cst.h..........s.htostast.........................h..t.pC.a. CONSENSUS/65% Cusplptst......GhlsSPsaPp.........................YssstpChWp CONSENSUS/50% CGuslpsss......GsIoSPsYPst........................YssspcCsWp BMP1_HUMAN/1-1 ISVTPGE-------KIILNFTS-------------------------LDLYRSRL----- CONSENSUS/80% lts..s.........l.lth............................pht......... CONSENSUS/65% Ipss.uh.......plplpFpp.........................hpl-sp.t..... CONSENSUS/50% IpsssGp.......plpLpFss.........................F-lEspps..... BMP1_HUMAN/1-1 ------------CWYDYVEVR--------DGFW-RKAPLRG-------RFCGSK------ CONSENSUS/80% ............C..-hltlh........ss........ht.......thsst....... CONSENSUS/65% ............C.hDalplh........-u.t...t.hlu.......phCGpt...... CONSENSUS/50% ............CtaDalclh........DGss..tsphlG.......+aCGsp...... BMP1_HUMAN/1-1 --LPEPIVST-DSRLWVEFRSSSNWVG------------KGFFAVYEAI CONSENSUS/80% .......h.s.ts.hhl.ahos.t...............tGFthta... CONSENSUS/65% ...s.thhso.ssphhlpFhoDtshp............tpGFphpatsh CONSENSUS/50% ...ssshloS.uNplhlpFpoDsoss............tpGFpApYpus
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |