Consensus terms for the CW domain

O62405/7-140     TRMVLIYGGITSSMT---STTT-TFETVEDCKNGCFEKEDCI----------------MM
CONSENSUS/80%    .phlhhhGpss...............shppChp.Ch.p.tCh................ls
CONSENSUS/65%    hpMlhhaGpssshs....spsh.th.shcpClptCatp.sCl................ls
CONSENSUS/50%    hKMlllaGcPsshss...ossh.sssoa--ClspCassssCl................LA


O62405/7-140     YFIF------EKCRFYSYAT-NGSPFSITEQSK--RQGAY--VAIKTDASNIPNNTCPAT
CONSENSUS/80%    h.........t.C.ha.h....st...lpp.pt....t....lshK....p.....Cs..
CONSENSUS/65%    at........psChhaph....sph.plpp.pt..sttth..lAhKh..ts.sp..Cs..
CONSENSUS/50%    Yts.s.....ssCplash....uslhslcchps..sssph..VAhKh..sspss..CPtt


O62405/7-140     --------FT-NIKF
CONSENSUS/80%    ........h....t.
CONSENSUS/65%    ........at..hph
CONSENSUS/50%    ......shas..hss

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T