O77212/1-85 DWLVEVAEEYKL--------------HRETLFLAVNYIDRFLS--KISVLR--GKLQLVG CONSENSUS/80% .hl.ph.tthth......... .....ph..hsh.hhchhh....thh....h..phlu CONSENSUS/65% palhchtpthph......... ...s.pshhhuh.lh-hhl...hphhp...hp.phlu CONSENSUS/50% saLtclscphsl......... ...spcstpLAhplh-+sLs.tpshlp...tpsphlA O77212/1-85 AASMFLAAKYEEIY----------PPDVTEFAYITDD----------------------- CONSENSUS/80% ssshhlAtph.p................p...h.t......................... CONSENSUS/65% suslalAs+h.pht...........ht.phhthssh........................ CONSENSUS/50% AuulalAsKhpcts..........shspslhphsss........................ O77212/1-85 -------TYDKKQILRMEHLILK CONSENSUS/80% .........p.tplhth.h.hhp CONSENSUS/65% .........stpplhph.phlhp CONSENSUS/50% .........spscltptpctllc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |