CEB0240_2-940 KEQEKGDQLLMELLPKSVANDLKNGI---------------------------------- CONSENSUS/80% .tttpt.thl..hhPt.lupthh.t................................... CONSENSUS/65% .tpppsppLLhphlPtplApphpps................................... CONSENSUS/50% tEcc+s-pLLsplLPcpVAcpL+pGp.................................. CEB0240_2-940 ---------AVDPKVYENATILYSDIVGFTSLC---------SQSQPMEVVTLLSGMYQR CONSENSUS/80% .............t.htpsslhFsDlhs.oth............tts.thhphlpthapt CONSENSUS/65% .........sh.spthpslollFoDIsuFTpls.........ttspPhpllshLsshasp CONSENSUS/50% ........tslsscsa-sVTlLFoDIVGFTsls.........spssPhplVshLNclYop CEB0240_2-940 FDLIISQQGGYKVILNRIMETIGDAYCVAAGLPVVME----------------------- CONSENSUS/80% hcthh.tht......shclcohGDsahss.shs..s........................ CONSENSUS/65% hDphltpts......sY+VcTlGDuYMlsuGhspts........................ CONSENSUS/50% FDpllspas......sYKVETIGDAYMVlSGlPpsss....................... CEB0240_2-940 -KDHVKSICMIALLQRDCLHHFEIPHRP----GTFLNCRWGFNSGPVFAGVIGQK--APR CONSENSUS/80% ...ph..hs..shthht..tth.............lphRhGhpsG.shstshshp....c CONSENSUS/65% ..pcttphsphsLchhp.hpph...........ptlplRlGlHoGsshsGVlGhp..hsR CONSENSUS/50% ..pHApphushuL-hlcshpshpsppp.....tcslplRlGlHoGsVlAGVVGl+..hPR CEB0240_2-940 YACFGEAVILASKMESSGVED--RIQMTLASQQLL--------EENFPQFVCSN CONSENSUS/80% hshaGpsVshAs+hpuss.....pl.hottsh.hl..........t..th.h.. CONSENSUS/65% YslaGcsVshAu+hESsutss..pIplSppshphl.........tptstathp. CONSENSUS/50% YCLFG-TVNhASRMESsGsss..cIplSpsohptL.........pcsssaphps
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |