209261.t3122_from_2_to_202AQEIELKFIVNHDAVDA----LRNHLHTLG-----GEH------HAPSQLLNIYFETPDN CONSENSUS/80% ..ElEhKhhh................th......................tshhhp.... CONSENSUS/65% hhElEhKhhlss...........thtphhtt................hh.pshYasss.. CONSENSUS/50% thEIElKhhlsst..........phpshtpthh.hht........tpppppshYaDosp. 209261.t3122_from_2_to_202-----WLRRHDMGLRIRGEN---------------------------GRYEMTMKIAGRV CONSENSUS/80% .........tt.tlRhR..t.............................h..sh+h.... CONSENSUS/65% ......httpphsLRlRths............................thhhTlKs.t.. CONSENSUS/50% .....pltpschuLRlRptst..........................tpthlTlKssst. 209261.t3122_from_2_to_202TGG-------LHQRPEYNVAL-SEPVLD------LTQLPAEVW--------PDGNLPD-- CONSENSUS/80% .............p.p.th.h....................................... CONSENSUS/65% ..........htt+tchphtl..t.................................... CONSENSUS/50% .........tspt+sEhEhslssst..............................tht.. 209261.t3122_from_2_to_202--GLASSVQPLFSTDFYREKWCLDV-DGS-----RIEIALDLGDVKAG------------ CONSENSUS/80% .......h.....h.hhpphh.h...tt.......h.htlD.hth............... CONSENSUS/65% .....thhh..htsthhc+hchhhhhtt.......hplslDpsph............... CONSENSUS/50% ...htphlhshhssspl++pRplhthss.......hclsLDpscs.st............ 209261.t3122_from_2_to_202-----------EFAEPICELELELLR---------GDTRAVLKLAKQLLSQTG-LRQGSL CONSENSUS/80% ................hh.hEh.h..............tt...hh..........thtt. CONSENSUS/65% ................hh-hElEh.............ttsh.thht.h...h..hthstt CONSENSUS/50% ..............tslsElElELps.........tsspshtphtpphhthhs.ltlsss 209261.t3122_from_2_to_202SKAARGYHLAQGN CONSENSUS/80% thh.pth...... CONSENSUS/65% s+htpuh..hhtt CONSENSUS/50% s+hp+uYh.hhsp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |