5875.TP02_0412_from_347_to_599/1-253TVRSTNLDEDEHPEFY------------YESDDHPSMVQLSD---------DLHPL---N CONSENSUS/80% asatt..t...........................t....ut.........tQSPI...s CONSENSUS/65% WsYpsttsspph................sph....st...Gp.........pQSPI...s CONSENSUS/50% WuYsussusppa................uch.hshss...Gp.........cQSPI...s 5875.TP02_0412_from_347_to_599/1-253-SGRSSSYKKLLENDRYDLFNKYLLTHLNNSANNLNSEQ--VHIRE----------KRMA CONSENSUS/80% l..t....p.ph....hth...tap....t.h.lhNsG+.oh.hth...........tt. CONSENSUS/65% IpsppshhsspLt..slph...sYp...stshplhNsGH.olplph..........ssp. CONSENSUS/50% IssspsphcssLs..sLph...sYc...ssshslpNNGH.olplsh.........tssss 5875.TP02_0412_from_347_to_599/1-253R--------------------EKG--THW-GR---WAVISL-TFMSE---------EIEK CONSENSUS/80% .....................lpG...........aph.ph.HhHhs...........SE CONSENSUS/65% h....................lpG..u.l.t....YphhQh.HFHWG.......t..GSE CONSENSUS/50% s....................lsG..GsL.sp...YcLpQh.HFHWG.....sssstGSE 5875.TP02_0412_from_347_to_599/1-253T---NIESL----KTFPSERFMSEVFKAGS-------SVPVT---ENDNYPSVG------ CONSENSUS/80% H...hlss......pashE...hHhVahs................t.stlsllu.hhhp. CONSENSUS/65% H...slsG.....ppashE...hHlVHhst...h.s.ttu.....pssslAVlu.lhhc. CONSENSUS/50% H...Tl-G.....c+aPhE...lHlVHhNs..patshspAhp...pssGLAVLu.lhlc. 5875.TP02_0412_from_347_to_599/1-253-----DLNTNH------VETPLP----------VVDLDTPLNLSSLFMMLEVKN------ CONSENSUS/80% ......sttt.......hp.lhp.h..........ttph.h.....hs.ttllP.....t CONSENSUS/65% .....huppsst.....hpplhstl...l....ttsppsthts...hshpsLLP.....p CONSENSUS/50% .....lGspsss.....hppllcsLs.plp...ppsspsslss...FslssLLP.....s 5875.TP02_0412_from_347_to_599/1-253-VNYFAYDGSFTQPG-------CEETVRWYVAKES-LPISTELML--QIHR--------- CONSENSUS/80% ..paapY.GSLTTPs.......h.EsV.Whlhpps.l.lottQht..thpp......... CONSENSUS/65% hppYapYpGSLTTPP.......CsEsVtWhlhpps.lplSppQlt..thpp......... CONSENSUS/50% spcYapYsGSLTTPP.......CoEuVsWlVh+cP.lslSpcQlp..pFcs......... 5875.TP02_0412_from_347_to_599/1-253-------------------MLNPNPHE---------QNPNNYVD-NYR----ELQN--VN CONSENSUS/80% .........................................h...NhR......Qs.... CONSENSUS/65% ...................hhstttt...............hhp.NhR....PhQs.... CONSENSUS/50% ...................lhssptpt..............hss.NaR....PlQP.... 5875.TP02_0412_from_347_to_599/1-253NKCRNLGKVR CONSENSUS/80% httR.....h CONSENSUS/65% lpsRhl..sh CONSENSUS/50% LsuRtVhsuh
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |