221109.OB2782_from_41_to_411AFNWNIDL-PAE--IHSQTVGK----RGPILKQDNIEHETLQTFIHEKITERPVHVKG-W CONSENSUS/80% TsstGh.l.sss..pps.psG.....pGPhLlpDhhhh-cls+Fs+ERIPERhVHA+G.s CONSENSUS/65% TTspGsPl.scs..psShoAGs....+GPhLLpDhhhhEKluHFsRERIPERlVHA+G.u CONSENSUS/50% TTssGsPV.uDs..pNSlTAGs....RGPlLLQDaaLlEKLAHFDRERIPERVVHAKG.u 221109.OB2782_from_41_to_411GAFGYFETLYS------MSDYTTLSFLQIPGT-QVPVFVRF-SLAVSTKGTPDTSRNV-- CONSENSUS/80% GAaGhFpshts......hsphTpAthhpt.Gp.pT.hhhRF.STVsGtpGusDs.RDs.. CONSENSUS/65% GAaGhFplop-......lopaT+Ashhpp.G+.pTslhlRF.STVuGppGSsDohRDs.. CONSENSUS/50% GAaGpFclTcD......locYT+AclFscsGK.+TPlFlRF.STVAGE+GSADTsRDl.. 221109.OB2782_from_41_to_411---RGFATKFYSEDGIFDLICNHIPVFSVRDTIRFPEAIKAFLPSPVNNL---ID-PTRY CONSENSUS/80% ...RGFuhKFYTp-GNaDlVGNNhPlFFlpDshKFPchl+s.K.pPtsth...ts..sh. CONSENSUS/65% ...RGFAlKFYT-EGNaDlVGNNhPVFFIRDslKFPDhIHu.K.pPpsph...ps.tshh CONSENSUS/50% ...RGFAlKFYT-EGNaDLVGNNTPVFFIRDulKFPDFIHotKR-PcTsl...ps.scph 221109.OB2782_from_41_to_411WNFVAR--APESLLFTLLVYSN-LGTVKSLRHLPGHSVNTYVWKNA-EGKRYFIKYTWAP CONSENSUS/80% WDFhs....PEuhH.lhhhhuD.RuhPtsaRhMpGausHTaphlNt.pGc.haVKaHaps CONSENSUS/65% WDFhoh..pPEohHtlhhlhSD.RGlPtoaRpMpGaGsHTaphlNs.pGcthaVKaHa+s CONSENSUS/50% WDFaSt..sPEShHQVTaLMSD.RGIPcSYRaMcGFGuHTF+alNA.cGEphaVKFHaKo 221109.OB2782_from_41_to_411IAGEEYIRNEEA-VK-LAGENPDIAGQDLHDAIE-RGEPVEYGLYIQIMDPKDAASLP-- CONSENSUS/80% .tGhpshs.p-A.tt.l.ups.-.tppDLapuIp.pGpaPpWphhlQlhs.tpttpht.. CONSENSUS/65% pQGlcsLs.-EA.tc.lsGpDsDapp+DLapAI-.pGcaPpWplhlQlhs.p-uppac.. CONSENSUS/50% cQGl+sLos-EA.s+.luGpDPDappRDLa-AIE.cG-aPcWcLtVQlMs---Acsac.. 221109.OB2782_from_41_to_411--YDPLDDTK-LWDQQQFPF-------KPVGVMKLNKNPDNYMEQVEKAAFSPTNL-LEG CONSENSUS/80% ..as.hD.TK.lhsct.hPh.......h.lGhh.Ls+NPpNaFs-hEQsAFsPuph.VPG CONSENSUS/65% ..asshDhTK.lWPccphPl.......h.lGphsLN+NP-NaFAEsEQsAFsPusl.VPG CONSENSUS/50% ..FsPFDlTK.lWPcc-aPL.......hcVG+MsLNRNP-NYFAElEQAAFuPuNl.VPG 221109.OB2782_from_41_to_411VELSDDKMLQGRANIYSDSQRYRIG-PDFRNVPVN------------------------- CONSENSUS/80% lt.SsD.hLQuRhFuY.DsphhRlG.sNa.plPlN.tPh...................ht CONSENSUS/65% IshSsD.hLQGRlFSYsDspRaRlG.sNapplPlN.pPh.................sshp CONSENSUS/50% I-hSsD+MLQGRLFSYsDTQRYRLG.sNapQLPVN.pP+.................sPVp 221109.OB2782_from_41_to_411-----NQSNWWP----------------------GDLVTSGDGRFVEGE CONSENSUS/80% s....ppDG.hp......................tstssY.Psphst.. CONSENSUS/65% sh...pRDG.Mp.............t.pt.....sspssYtPNohssst CONSENSUS/50% sa...pRDGsMp............hssss.....susssYcPNShsusp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |