33169.AGOS_AFR621C_from_409_to_496LCA-----LVHRE--KSDLFQTQCTIDEAYDYYTKLLSDTIALN-PLNR-NEFLESCDTL CONSENSUS/80% lhs.....lh.....t.......hphuplhp.appls........shs..pph.phhppL CONSENSUS/65% Lhu.....llhhh.pptt..tt.hssGclaphYpplstth.t.p.sls..pchh-hlscL CONSENSUS/50% Ltu.....llthp.ppst..pp.losG-lYctYcclspph.shp.slop.sRlp-llscL 33169.AGOS_AFR621C_from_409_to_496EMYGVASIENGKHGKKAKQLVKLIKS-TVD-EKEFHDEI CONSENSUS/80% p.hsllphp..p.....huphp.htl.ths..t.l.phl CONSENSUS/65% chhGllpschsstGh..tG+sphlpL.phs..pplhcsl CONSENSUS/50% -hlGllsschss+Gc..cGRT+cIsL.ss-.scclpcuL
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |