5880612/1-0 YDAWVATQVYV--------AGDRVEVDG---RVFEA------QWWTQG----QHPLVSG- CONSENSUS/80% hstWtsstsYs........sushV.apu...t.Yps......thhst.......Ps.... CONSENSUS/65% hssWssspsYs........uGshVsasG...psYpA......paasts....ppPu.... CONSENSUS/50% sssWsuussYs........uGspVoYsG...ssYcA......pWWTpu....psPut... 5880612/1-0 ------PWGSWMEV CONSENSUS/80% ......s.s.Wp.. CONSENSUS/65% ......ssssWp.h CONSENSUS/50% ......ssusWppl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |