335543.Sfum_0708_from_3_to_99FFEA-RNVVVVGVSN-APGNLGRLMAANLMEF----HFQG---NIFL-----VGPK---- CONSENSUS/80% hhp..pplhl.Ghtt..st..th..h.th........hhh...tl.s.....ss....t. CONSENSUS/65% hhs..pplsllGhos.psp.hut.hhhphht......hhu...slhP.....lssph.t. CONSENSUS/50% Llss.psVAVlGuou.pssthustthtshhp......hsG...slhP.....Vssphts. 335543.Sfum_0708_from_3_to_99---GGSFLGH--KIHARITDVDDA-------IDLATILVPAPAVPEVLRQCGEKG----I CONSENSUS/80% .............sh.sltph.t........hphshlhhss.hs.thh.phhtts....h CONSENSUS/65% .............sasslt-hspt.......s-hullhlPsths.pslp-shptG....l CONSENSUS/50% ........s..hhsasolp-lscp.......lDlulIsVPustsscslcEslcsG....l 335543.Sfum_0708_from_3_to_99PRVIVQSAGF CONSENSUS/80% .hhlhhs.sh CONSENSUS/65% pthlhhotGh CONSENSUS/50% csllslosGh
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |