6239.K09H9.3_from_3_to_56KFVIGSVSTAAFFVSVCTIYFSVS------MLDELDSFRLSIRDE--------------- CONSENSUS/80% hhs..shshohh.shhsshhshs.......lhp.lpph.pph.tp............... CONSENSUS/65% hhsh.usshSsl.ullsslhslsh......las.lpphpsplpp-............... CONSENSUS/50% hluhsulslSsl.AllusllslPh......lasplsslpsplpsE............... 6239.K09H9.3_from_3_to_56-LEDWKEVSDDTWQRL CONSENSUS/80% .ht.h+..spshatph CONSENSUS/65% .hp.h+tpspshWpch CONSENSUS/50% .lsthKspucDhWs-h
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |