243161.TC0528_from_326_to_404KTASLI---ERTFSGNTPLSEIENELNISFS---------------------------DN CONSENSUS/80% ...tts...phhlpu.h.lpchtphhshph............................tp CONSENSUS/65% hphscs...sahlsGthslc-lpchhshph............................pc CONSENSUS/50% ppps-G...sallcGpsslc-lsctlulcls...........................c- 243161.TC0528_from_326_to_404--------ECE----TIAQLMLKLL----DTPPEVGAS---IIINGL------------- CONSENSUS/80% ........thp....TluGhlht.h....tphPt.sp....hthtsh............. CONSENSUS/65% ........phc....TluGhlhpth....sclPphG-p...lphtsh............. CONSENSUS/50% ........-h-....TluGlllppL....G+lPptG-s...lchsuh............. 243161.TC0528_from_326_to_404--------------LLEVKEISLS----GIKTIEIKDTL- CONSENSUS/80% ...............hplhphptt....plttlhl..... CONSENSUS/65% ..............phplhchcsp....+lppltlph.t. CONSENSUS/50% ..............cacVlcs-s+....RIcclclphss.
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |