33169.AGOS_AFR498W_from_654_toLAASRVQAISAAVVRQLKTERT--MAHTELQDAAVRALQRH-----------FAVSTSMF CONSENSUS/80% h.pp+t..lpuslVRlhKtc+p..htaptLhtpshpphp.............h.sp...l CONSENSUS/65% lppcRph.lpAuIVRIMKs++p..lpHspLlsElhpplptp...........F.spss.I CONSENSUS/50% lccDR+hplcAAIVRIMKuRKs..LsHspLlsEVlsQLcsR...........FpPslstI 33169.AGOS_AFR498W_from_654_toKRAIQSLLEKEYIQRDAHSPD CONSENSUS/80% Kptl-.LIc+calpRttps.. CONSENSUS/65% KcpI-tLI-+-YlpRsppstp CONSENSUS/50% K+sIEsLIE+EYlcRsccsss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |