340322.cgR_2236_from_92_to_310GECPAVVAVVARGSEQNLQIRPARYSEESPWTSNGFEERNF--RSFFGRMEKHYRESAG- CONSENSUS/80% tsCssl.hlhspGo.-...............sshu..........hh.shspslptth.. CONSENSUS/65% ssCPDlpllhARGTsE..............ssGhG.........thGpshssuLpsphs. CONSENSUS/50% ssCPDVcVlFARGTsE..............sPGlG.........slGpuhlcuL+sphu. 340322.cgR_2236_from_92_to_310---ESLMKDVYVMGLNNIEYPASLPLSSEGSSAIE-----------FGTSISSGRDNVIS CONSENSUS/80% ....stphth.sls.....YsAs.t.......................tsht.Ghtsh.t CONSENSUS/65% ....spslssasVs.....YPAshs.....................a.suss.Gspcsss CONSENSUS/50% ....u+olslYuVs.....YPAohs.....................atsoss.GssDuss 340322.cgR_2236_from_92_to_310AIDRFESATGCTPKYLLAGYSQGVLIVDGYEEELIAR--------------------DQY CONSENSUS/80% hlpthhtpC.PpTphVlsGaSQGA.lhs.hh..................tshss...ppl CONSENSUS/65% plpphsspC.PsT+hVLuGYSQGAsVhshssss.hss............sslssth.spV CONSENSUS/50% +lpshsspC.PsT+lVLGGYSQGAuVsshlsusssssh........s.ssPLPssss-+V 340322.cgR_2236_from_92_to_310LGTLHIANPAQQ--VDDPTLVG--------------------------HEVTTGGLASSV CONSENSUS/80% tulshhupst.....th........................................t.. CONSENSUS/65% uuVslaGsPp....sthh.......................................ss. CONSENSUS/50% AAVsLFGsPu....sshs..h....................................uss 340322.cgR_2236_from_92_to_310EPVE-------------DNPFK----VSYCL--PGDIVCDRSFE---------------- CONSENSUS/80% .shs.............hss+s....hphCt...sD.hCs............s....... CONSENSUS/65% sshu............hhss+s....hshCs..suDslCss...........Gtsh.... CONSENSUS/50% sshGs...........hauu+T....lslCs..sGDPlCss...........Gssh.... 340322.cgR_2236_from_92_to_310------------QFSAAG--SSIAAAQL---STGNI CONSENSUS/80% .......sH....Y..ts....ttuhth...hhtth CONSENSUS/65% ......ssHht..Yssss..hsspuspa...ssspl CONSENSUS/50% ......suHts..Ysssu..hsspAAsF...lsu+l
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |