7159.AAEL012636-PA_from_6_to_8EFTRQEVALR-----DGK-NGSPIWIIIR-------------DVVYDVTS---------- CONSENSUS/80% .hs.ppltt...........tt.hhhhhp.............s.Va-lo........... CONSENSUS/65% hhohpEltp...........tpphalslp.............spVYDlothht....... CONSENSUS/50% haThcElscHpt.......tsscsWlllc.............GcVYDVTsahp....... 7159.AAEL012636-PA_from_6_to_8------YVDEHPGGP---------ELVTDF--------AGRDGTKDFDDF---------- CONSENSUS/80% ..........tsG...........t.h...........sGpDhot.h............. CONSENSUS/65% ..........HPGG..........thlht.........AGpDsTc.att........... CONSENSUS/50% .........tHPGG..........sslhph........AG+DATcsFss........... 7159.AAEL012636-PA_from_6_to_8---------------------GHS---------STAMEMLKQYKVGELN CONSENSUS/80% .......................t..............h....hlG.h. CONSENSUS/65% ......................pp..........hhphh.t..hlGplt CONSENSUS/50% ....................tscs.........sshcphhph.hlGpls
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |