290399.Arth_2011_from_261_to_356ALTVRAVVLSTPE------DGIAVVGAGKRDLPYDAGLPVVLSVHTAD------------ CONSENSUS/80% Ah.lhspVhSt.........t.hlhssGhhshsh-.sh...................... CONSENSUS/65% AlplhupVlSp.p.......shsllssGh+sluhDtuh.........G............ CONSENSUS/50% ALpVluoVlS+sp......sscAllDAGp+ulotDsGsshs...hhsG............ 290399.Arth_2011_from_261_to_356-GTPRAG-------------------AAAVVRNLFDHHTVLTGVNG-------------- CONSENSUS/80% ..t........................th.h.thsppHuhlt..stt............. CONSENSUS/65% .hu.......................sshtlsths-EHuhlphsssst............ CONSENSUS/50% .aGhlhs..................hsshplsulu-EHGhLpssssss............ 290399.Arth_2011_from_261_to_356-------------------LEVTDVV-DFGISHPCSAFDRWPEYVVTD CONSENSUS/80% .....................lGphl.thh.sHsC.shsha..h.hhp CONSENSUS/65% ...................htlGshl.tlhPsHsCsThshashhhllc CONSENSUS/50% ...................lpVG-pl.cllPsHsCsTsshacphhllc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |