cek06a1_6 VMTNYFSIGADAHVALQFHHSRSANPQMLNSRLKNRIAYGGLGTIDLFK-RSWKDLCEYI CONSENSUS/80% hhsNYhulGhDAplshpFH..REt.PpthpSRhhNKhhYhthGhp-hh..psh+sLtppl CONSENSUS/65% lhNNYFulGlDApluLcFHttREppPc+FsSRh+NKhhYhphGsp-hhh.pohKsLpcpl CONSENSUS/50% lMNNYFSIGlDAclALcFHspREcpPEKFsSRh+NKhaYschGTp-hht.+osKsLpcpI cek06a1_6 TLECDGVDVTPRIKELKLHCILFHNITYYAGGTIPWGE---------------------- CONSENSUS/80% pl.sDG..lphs.....hpGlhhLNIs.htuGsp.Wut...................... CONSENSUS/65% clpsDGhplcls....plcGIllLNIPSatGGsshWGp...................... CONSENSUS/50% cLECDGpcl-Ls....sLEGIllLNIPSauGGosLWGp...................... cek06a1_6 --------------SSDNKPSCCDGKVEVLGFTTATLAAL-----QMGGK---------- CONSENSUS/80% ...............phth.phsDthlEVlulpss..hu......tltht.......... CONSENSUS/65% ..........t.tt.shsh.shsDtllEVVGlpsshphuph....tltht.......... CONSENSUS/50% ..........sppppssssQchDDplLEVVGloushahuQl....plphp.......... cek06a1_6 -GERIAQCSRVR-----VITNKAIPMQVDGEP CONSENSUS/80% .shplsQspps......hhsppshPhQlDGEs CONSENSUS/65% .upRluQCpplh....hlhspcshPhQlDGEP CONSENSUS/50% .ucRlAQCpcV+h...sltTp+slPMQVDGEP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |