JE0368/48-139 NEKKAKKVRFYRNGDRYFKGIVYAVSSDR-FRSFDALLADLTR--SLSDNINLPQ-GVRY CONSENSUS/80% ..hhspplhhh+NG-..htthphhlppcp.hpsh-.lLptlot......thp.s..hl+p CONSENSUS/65% shhps++lphhRNGD.hhpuhplllspcp.hpSa-tlLpslTp......plchs..ul+p CONSENSUS/50% shh+s++lplaRNGDcaa+Gl+llls++p.s+SF-sLLcclTc......plcsu..uVR+ JE0368/48-139 IYTIDGSRKIGSMDELEEG-ESYVCSSDN-FFKKVEYT CONSENSUS/80% laohpG.p.lhphpph.ps.t.alssstp..hh.sph. CONSENSUS/65% laThcG.cplsslc-lpsu.ssYVssusp.tFphsphs CONSENSUS/50% lYTl-G.+clsSL--lE-G.ssYVsuusc.pF+slcYs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |