PDC2_YEAST/198-406IEVATVMLCSNLDGSEKLKPVVVGKYDSYKSFRNYFPNEPNDPVSQSMLGTKMAKKFDIS CONSENSUS/80% .tphohhhps.hsssc+L..hllhhspp.pshh........................sh. CONSENSUS/65% ppclTlhlssNssGuc+L.shlIh+ups.+shct.................h.spshshp CONSENSUS/50% cc+lTlhlCuNAsGoEKLsPhVIGKucsPRuF+s.................hpspshshc PDC2_YEAST/198-406YHSNRKAWLTSNLFHNWL.VRWDKRLV........AVNRKIWIVLDDSCCHR.IINL... CONSENSUS/80% ap.ptpuhho.tlh.pWh..ha..pht..........tp+hhLll-s.ssH..h.p.... CONSENSUS/65% apssppuhhTsplhpcWL.chF.spht..........scKslLlLDstsuH..shp.... CONSENSUS/50% Y+uNcpAWhTsslhp-WLp+hFcsplc.......hs.s+KlLLlLDupsoHp.ssph... PDC2_YEAST/198-406...RLQNIKLVY..TSSNSKFLPFNWGVWDEFKTRYRIQQYQALIDLQNRISKNIQNKNK CONSENSUS/80% .....tph.hhhhPspssphhpPhp.ulh..hKt.Y+h.h.p..ht..p...t....... CONSENSUS/65% ...t.pNlhhlahPspssslhpPh-.GlhtshKtpYRtthhphhltt.pthps....... CONSENSUS/50% .ptshpNlpllalPssosSllQPh-pGVlsshKspYRtphhpthlsttsslss....... PDC2_YEAST/198-406SERNECIPNGKKCLISFEQSQLTMSNAFKFIKKAWD.DIPVDAIKANW CONSENSUS/80% .......................h.phl..hhhuap.tl..p.I.tsa CONSENSUS/65% ...................tthshhpAlphhhtAWp.sls.psItssa CONSENSUS/50% ..................hpphsllcAlcaltcAWs.ulsscsIpsuW
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |