B2RJI0_PORG3/108-279GQCTGISFIDSTPLKACHIK.................................RAHGHRT CONSENSUS/80% .....hhhlDup.hth............................................ CONSENSUS/65% ttttphhhlDus.hps.ttt........................................ CONSENSUS/50% psspslhllDuTslcsspss........................................ B2RJI0_PORG3/108-279MRGW.....AQK.GKSTMGWFYGF..KLHIVINDR.GE....IINYQI..T.PGNCDDRE CONSENSUS/80% .............ttp....h.sh..ph.hhhs...t......hth.h....ssp.t-.p CONSENSUS/65% .........tht.ssp...hhhsh..+hphhhssptth....hhshhh..s.sussp-tp CONSENSUS/50% .t.h.....shs.ss+...tptGh..KhplssDspssh....llshsl..s.susssDsc B2RJI0_PORG3/108-279PLKD....GTFTKN.........LFGKLIADRG.YI.S....QNLFDRLF.VDDIH.... CONSENSUS/80% hh....hhp.h...............hhhhDtu.a..t.....thht.ht.......... CONSENSUS/65% hhht..hlcth............ththlhsDtG.Yt.t....hphhptlp.......... CONSENSUS/50% shps..llcplp...........psshlluDuG.Ys.s....tshhcplp.phth.hhh. B2RJI0_PORG3/108-279.........................................MITKIKKNMKNSLMHLYDK CONSENSUS/80% ...........................................t..t...htt.tt...h CONSENSUS/65% .........................................hhtthptphhpphppttth CONSENSUS/50% .....................................hptthppptcppshscpcptpst B2RJI0_PORG3/108-279............................................................ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ B2RJI0_PORG3/108-279...................VLLRKRALIETVNDMLKNV.CQ.IEHTRHRSVNNFVTNLIS CONSENSUS/80% ....................hhthRh.lE.hht.hpp..ht.h.thph.t..t....hhh CONSENSUS/65% ...................thhptRhtlEpsaphh+p..ht.htphphcphtthptthhh CONSENSUS/50% .................h.plhppRhplEpsFctlKs..ap.hpcpchcshsssptplhh B2RJI0_PORG3/108-279G..IIAYNI CONSENSUS/80% h..hhhh.h CONSENSUS/65% h..hhsh.l CONSENSUS/50% h..thuhsl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |