Consensus terms for the DDE_Tnp_1_5 domain

A0B5M1_METTP/17-126VRRG..WFYLSTDFVNNWDEELLKMNKNKNGRPYRYPETFIQFC.GLAYAFLHLPYRQLE
CONSENSUS/80%    hpRGslohWhDpph..tW..t......sp+G+s.haSDhuIphs.LhlKhlFthsLRthp
CONSENSUS/65%    hpRGSLThWlDpsh..sW.hs..s.s.uKRGRsphaSDsAIphs.LslKslFuLPLRthp
CONSENSUS/50%    ppRGSLTlWlDc-sl.sW.pu..sss.GKRGRPppYSDsAIQsC.LolKsLFuLPLRQsp


A0B5M1_METTP/17-126GFIQALSGFVPG.LLAADYSTLWQRITNLELNIPIPDND....LVVAVDSTGMKVTNR
CONSENSUS/80%    GhlpSlhthhsl.h.sPcaosls+Rtpplplth..pttsts...plhlDSTGlKhhG-
CONSENSUS/65%    GFlpSlhcLsslshssPDaSolsRRt+slsVplsh+spots..hHlllDSTGlKhhGE
CONSENSUS/50%    GFVsSLl+LuGLsLslPDYSTlSRRpKoLsVslPh+ssocu..LHLlVDSTGLKVaGE

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T