D0MDA7_RHOM4/122-260QLSG...E.IEMDESYFGGRR..........RGR....RGRG..........AVGKLPVF CONSENSUS/80% .LtG.....lchDtsahsst............tt....pttt............t+h.lh CONSENSUS/65% .LsG.....VEhDtsYlGGp.....t....hhsp....ctpt...........tsKtsVl CONSENSUS/50% hLuG...p.VElD-oYlGG+sp..hstppppts+....Ru+p..........sssKssVl D0MDA7_RHOM4/122-260GILERG..............G...KVKVEVV.PDVRAETLLREA....IRKVRRGSLIYT CONSENSUS/80% shhpp...................pshh.hh..s.stpplh.hh.....phlp.suhlhs CONSENSUS/65% shhpR...............h..tcshsthl..s.stpslhths....tphlc.suhlho CONSENSUS/50% uhlERs..............ttst+slsplV.tspsscsllshl....p+hVcsGSslhT D0MDA7_RHOM4/122-260DRFRSYDGLVCY.GFRHERIDHGQRF.....AN.........GK..VYINGIEGFWSYAK CONSENSUS/80% Dt.ttaptl.....h.h.thspttp.......s.........t...hp.shhcshhu.h+ CONSENSUS/65% DctssYctLttt..asppplsHttc......hs.........tt..sssNhsEuhhuhh+ CONSENSUS/50% DEssuYcsLstp.hasHcsVNHupct.....ts..p......ss..lssNslEoaaoplK D0MDA7_RHOM4/122-260ERLL.KYHGLS.ALWFPLYLKELEFRYN CONSENSUS/80% chhhGha+ths..pah.hYhsEh.aR.s CONSENSUS/65% RhhhGhaHthu.tpahptYhsEhsaRhs CONSENSUS/50% RulpGsaHplS.s+YLppYlsEhsFRaN
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |