710552/1-95 SMSPQSPCERTDIRMAIVADH---LGLSWTELARELNF-----SVDEINQIRVENPN--- CONSENSUS/80% .....t........h..hhp.....htpWt.hsptlth.......t.hp.ht.p...... CONSENSUS/65% .stshphpp.sptphtthhsh...hspsWppLAppLsh.....pppplpthpppss.... CONSENSUS/50% sssstslsssscpclspltct...suscW+cLA+cLsl.....s-scIcplcscsst... 710552/1-95 -------------------------SLISQSFMLLKKWVTRDGKN------ATTDALTSV CONSENSUS/80% ...............................h.hLp.W..ttt........tshttLhts CONSENSUS/65% ............................p.shtlLptWhtpps........sslssLhps CONSENSUS/50% ..........................htppstpLLcpWpppcGpp......uolssLlpA 710552/1-95 LTKINRIDIVTLLEGPI CONSENSUS/80% Lpphth.thhp.h.t.. CONSENSUS/65% Lpphshpchschltpth CONSENSUS/50% Lcchups-sl-tlpssh
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |