Q9VXP5/232-370 DRQILKFQAYWDDRTEF-----GDVRKLELCYYLSDDTIEIKEQHIRNSGRDGP------ CONSENSUS/80% ptphLtF.A.h.ps..........hRph.l.Ya.tDsohplh....cNp........... CONSENSUS/65% cpplLpF.Ahap-sss......ttlRph.lhYYLpDDolplhE..s+NSGh.t....... CONSENSUS/50% DpcVLsFtAhac-sls......sclRcapIaYYLsDDTlElpEPcV+NSGhht....... Q9VXP5/232-370 ---------TVFLKRGRLAREFEGLQLPGQMTPMTLLNVLGTNMRNVR---YCVDPLNTG CONSENSUS/80% .........thhl+Rp+l.p........................................ CONSENSUS/65% .........sphl+Rp+lsc........................................ CONSENSUS/50% .........GpFL+RsRlsK.......................................s Q9VXP5/232-370 NKEIHYYREKDLQIGSVINVYGRAVVITEL-DPFTQNYYRQRY CONSENSUS/80% ......hp.pDh.lG.plslas+.hhlhsh.D.aTt..htpth CONSENSUS/65% ....pahphpDL.lGsslslau+pahlhDs.DpFTpsahpppt CONSENSUS/50% ssct-aY+scDLslGssINlaGRpF+IlDC.DpFTpsaLcs+s
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |