Q9VU48/326-424 ALGSYRWSVYEAFTALAIRMKLNGR---VCVLKSICESAAA------PFDDRNG---LLG CONSENSUS/80% ..t..ch.hathhpthhtphshp.t....ClhRslCE.tt.............s...hht CONSENSUS/65% .tpttRh.lYptlEshhpphuhssp...sClLRslCEsup........hppppG...hhs CONSENSUS/50% hpcpsRttlYctlEshhcphGhsGp...uClLRoICEsupt.......hscppG...llu Q9VU48/326-424 EVLHILLTPS--------SSVDPLSEHSDNDYLQAERLGAAG----GDCDQVYP---RCP CONSENSUS/80% clhphlhp.s.................h.spY.pt.t.t........sCtthh....pC. CONSENSUS/65% -lhphlho.s..............ttthcscYhcA.phutt.....scCtphas...cC. CONSENSUS/50% Ell+llLoPs...........t..csst-scYccAhcsGptt....sDCsphYs...cCs Q9VU48/326-424 KSLLEH CONSENSUS/80% hshh.h CONSENSUS/65% hshhth CONSENSUS/50% pShlph
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |