gi|7301481|gb|A SELNKEYYTFEAD----ESQFEDPLAAQKIAGSVNKGLRVVFIKGPENRG-LENAALALA CONSENSUS/80% s.hpKphasassP....Epp....tt...hu...p+phpllFIKsPppps...ttsltht CONSENSUS/65% s.lpKcaasasAP....Ep-..ptpps.plus..pKsh+VVFIKuPpsss..tpssLths CONSENSUS/50% sllsK-FFTauAP...tEcEap-pssspplAs.l+KNYRVVFIKAPssss..psAALslA gi|7301481|gb|A KQAAEQRTAIYVLNKQTDIGDLAQKFNAARQ-NSNQRPEVHFVKYRTP CONSENSUS/80% ...sppcThIYVLsKpsp..p.tp.htsh...tpspKPEVaFlKY+T. CONSENSUS/65% .tssEp+TsIYVLsKps-..pltphltsh...spssKPEVaFlKY+T. CONSENSUS/50% psusEEKTlIYVLoKKsDhs-Lscplsssss.sssSKPEVaFIKYKTs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |