DS06874.1 SCLED--PCATEMLAIDLTHYKPSDMGKRKYPRTWFECVVKRR--KRKAHCVPVP---PP CONSENSUS/80% tCh.s...Cs.th..hD..aYp.SDK.pRcappTWsEC..h.h..h.KthCh.t...... CONSENSUS/65% pCpss...Cshsh..hD.haY+PSDK.sRcYQpTWsECshhhh..+.KchCs.st..... CONSENSUS/50% -CssD..sCspshhsaDlpYYKPSDKtsRKYQRTWsECPhlpl..KPK+lCCacc...ts DS06874.1 MPRRKRKSKKPRCPEDLCVLGKLELNLIKPCVKES--SKCPRFRM-PNCCVAARDPPKCR CONSENSUS/80% h.t.hh+p...hhs.t.sshs.......h.p........Cs+hth.stCpsuthss.pC+ CONSENSUS/65% h.p.ph+p..shhsps.Csts.......h.Ch.tt..tsCP+hph.PsC+suctsP.pC+ CONSENSUS/50% hP+++p+cphstsPsusCsss.....thh.ChscstpuPCPRl+h.PsC+sARpPP.sC+ DS06874.1 --RPFRRCGQRPKTKYPSFSECRRDPFPDPRP--IECNCLLKPAICDMWRHYR CONSENSUS/80% h.Rh.opC.h+.hs.aPSFSECpp..hst......ECtCh.hsshC-hhtthp CONSENSUS/65% h.RtPosC.p+.ts.YPSFSECp+p.lss.ss..hECpClthsshC-hhtphp CONSENSUS/50% ssRsPocC.cRs+TPYPSFSEC+R-cLscsPs..sECpCLcsPulCEhaRchR
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |