33169.AGOS_AFR226C_from_234_to_357IRKL--SGNLHEFGPVPVTDT--------------------------------LSARG-- CONSENSUS/80% lhtl..hG.thhpphh.hp.tt...............................hpltGhh CONSENSUS/65% lttl..hGtphtpphl.lphpptt.............................hplpGal CONSENSUS/50% lssl..aGsshscsllslctpsss.............................lplpGal 33169.AGOS_AFR226C_from_234_to_357VLPSMTRGAEV-----------TQTKKTIKAVALNRRPMSLSL----------------S CONSENSUS/80% s.st..................tptptth.hhalNtR.lpt................... CONSENSUS/65% upPph.................s+sppsh.hhalNsRhlcsph................. CONSENSUS/50% upPsh.................sRuspstQalFVNGRhV+spt................. 33169.AGOS_AFR226C_from_234_to_357LGSAVNKMLNKTYRSYSLP---------------------------------DPTIWMVE CONSENSUS/80% l.psl.....tsatthh..................................tphPhhhl. CONSENSUS/65% lppAlp....puYpshl.t................................spaPhhhL. CONSENSUS/50% lp+Alc....puYcshLsp................................s+aPhhlLp 33169.AGOS_AFR226C_from_234_to_357LECD-------------------PHLVDV-NIEPTKDDAAIS--SLATLIQC-LQDALEP CONSENSUS/80% lphs...................st.lDl.NlcPsKtclhht..ptp.lhth.l.ttltp CONSENSUS/65% lpls...................PptlDV.NVHPsKpEV+Fp..ppp.lhph.lhpslpp CONSENSUS/50% lcls...................PspVDV.NVHPsKpEV+Fc..ccctlhsh.lppulcc 33169.AGOS_AFR226C_from_234_to_357III CONSENSUS/80% hht CONSENSUS/65% sLt CONSENSUS/50% sLs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |