7165.AGAP002614-PA_from_39_to_177QFLQVHGRKCKIHL--DASVATAAENPAIM------Q--GQKDNLIDRFDVRAHL----- CONSENSUS/80% ..l.lhGhtsplah..Dsthsthhpp.tth...hsW...Gp.p.hIDRaDsRshL..... CONSENSUS/65% p.LtVaGhps+lah..DsthAtts-psptL...lPW...GcsslhIDRaDsRutL..... CONSENSUS/50% ppLpVaGppCKlFc..DDshApus-ssspL...lPWp..GDsslhIDRFDsRuaL..... 7165.AGAP002614-PA_from_39_to_177----DYIPPVPRTNPPDQP------DAPDVDDADERAM----NYERYRVLAQNEFLGIVE CONSENSUS/80% ....p.l........................s.tp..h....s.ERYh.Lh.p...t... CONSENSUS/65% ....c.ls.hp.t...............tt.ot-Etph....s.ERYhsLhpschpt.tc CONSENSUS/50% ....Dhlsphc.sp.t..........pssphopEEpclEt.h-aERYRsLhps-hcshs- 7165.AGAP002614-PA_from_39_to_177EKYLHQLYLEEQFGVNAQIEAE---------TKAAAAAAKKKSSAGAAIGYTY---EETE CONSENSUS/80% pp.................tt..........pp...t.t......hstlsapY...tstt CONSENSUS/65% cc.................pp..........c+..tthpttt.t.hspluasY...-sss CONSENSUS/50% cEhLppl..p..h......Ept.........++.ppppspcsts.huslGFsY...-sss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |