45157.CMK137CT_from_41_to_100RLEDDLDF----FEEDDDFDEFELH----------------------------------- CONSENSUS/80% ttt.t.th....hE-DDEFE-F..p................................... CONSENSUS/65% ppp.phsh....LEEDDEFE-FPs-................................... CONSENSUS/50% sppschss....LEEDDEFE-FPl-................................... 45157.CMK137CT_from_41_to_100-------NWEPDLAAVE-------------------EDEL----------EWQDD----- CONSENSUS/80% .......pW.tttp..t......................p...........WE-s..... CONSENSUS/65% .......cWstpcpttp....................tsp..........lWE-s..... CONSENSUS/50% .......-Wssc-scps...................tssp..........LWE-s..... 45157.CMK137CT_from_41_to_100WEMIDQ-DEDFAAKLAAELAQ CONSENSUS/80% WDD-sh.p--FotpL+tELpp CONSENSUS/65% WDDD-s.pDDFSpQL+pELc+ CONSENSUS/50% WDDDDl.-DDFSpQLRcELcK
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |