29760.GSVIVG00018571001_from_1RGYLCQKCWLALED-CMCSK--VIPCVLW------HGIRFWLYMHP-------------- CONSENSUS/80% .h.hC.tChh.....ChCt....h...............hhll.as.............. CONSENSUS/65% pt.hC.pChhshph.ClCsh...h...............lhll.Hs.............. CONSENSUS/50% +phpCtpCthPhst.ClCstls.lsssht.........tlllLpHPt............. 29760.GSVIVG00018571001_from_1------------KDFLRQ--NNTGKLLWQVFGVKAATLCLF----------GIAEHEEIM CONSENSUS/80% .............E..p....souhlht..h..t..hhhh.................th. CONSENSUS/65% .............E.h+...tsTupLlu.hl..s..hhhhs...........ht...thh CONSENSUS/50% .............Ehp+s..sNTu+LlAssLspsstthhhs..........ptpstsplh 29760.GSVIVG00018571001_from_1WNTFAL------AGKSNVWCLYP---NKN-APTKSVQDIFAQESLGG------------- CONSENSUS/80% ................tshllaP...s................................. CONSENSUS/65% t..............hpshllaPt..u..hp....h.tt..................... CONSENSUS/50% sths..........ttpshLlFPs.pupsspshptsssph.................... 29760.GSVIVG00018571001_from_1----------------------LECSSTTTNREKILNFILIDGTWNNSAAMFRR-LKEQA CONSENSUS/80% ....................................hhlhlDuTWpputphhp....s.h CONSENSUS/65% .................................t..hhlllDGTWppAp+hhp...hssh CONSENSUS/50% .................................chhplllLDGTWpcA+KMa+...psPh 29760.GSVIVG00018571001_from_1KLAWGEEDLPCISLAMG-----------------ASAMHKLRPQPS-----------WDR CONSENSUS/80% ltth.hltl...........................t.h.hRpt.t...........ttt CONSENSUS/65% Lptlstlpltst........................sphhlR+p.p...........pst CONSENSUS/50% LpsLPplsLssp........................upYtlR+ssp...........css 29760.GSVIVG00018571001_from_1TCTAAAAIGLLSELQLIPEFGSYGLD-----------------------------KQAEA CONSENSUS/80% hsThEshhhhLt.ht............................................. CONSENSUS/65% LuThEssthhLt.httt..........................................t CONSENSUS/50% LSTlEAuuhsLsthpps..........................................t 29760.GSVIVG00018571001_from_1VEDALAVLLEALTARRLRMGR CONSENSUS/80% ..p.L...hphhhp..htth. CONSENSUS/65% thpsLhthaphhhphhhttts CONSENSUS/50% ttcsLlshFcthhpphlssps
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |