6239.T14G8.1_from_1272_to_1421SDNGELLQT-DEDYEE------------RRRRREERSE-KLPPLLAKVNGQIEVLGFNPR CONSENSUS/80% .ssu........p..p............+pptptp.......slhtt.stphcVLGFs.p CONSENSUS/65% .ssu........shppt.t.........R++pRpppp....sPLhtt.GtplcVLGFNt+ CONSENSUS/50% scsG.....tD--a--sspss..t...hR+++Rc-p-c..LPPLLAclGGslEVLGFNsR 6239.T14G8.1_from_1272_to_1421QRKAFYNAVMRWGMPPQD--LTQSSW--QVRDLRNKSEKVFK--AYSSLFMRHLCEPVVD CONSENSUS/80% QRphFhpslhRaGhss.-.......W..hh.pL+.Ko.cthp..tYstLFhpHlsEshs- CONSENSUS/65% QRchFlsslMRaGhss.D.......W..hlpcL+sKo.cphp..sYssLFhpHLsEsssD CONSENSUS/50% QR+uFLNAlMRaGhPspD..hhpspW..hl+cLRsKSp+EF+..AYuSLFMRHLCEPusD 6239.T14G8.1_from_1272_to_1421-NSDSFM--------DGVPREGLNRQA-VLSRIGLMSILRKKVQEFEKFNGEWSMPETRE CONSENSUS/80% ..u.pas........DGVP+EGhphpt.lLsRluhh.LlccKVp.hpphsst..hsph.. CONSENSUS/65% .sussFu........DGVP+EGlsppc.VLsRIulhsLl+cKVpth-phsGp.shPphh. CONSENSUS/50% .sS-TFu........DGVPREGLsRQc.VLsRIGlMSLIR+KVpEFEchNGphShP-ht.
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |