220664.PFL_2235_from_48_to_447RQGFSRAMSDMYRE-EVPLYGALME------LVAEVNAQVLERQPALA---RHLQSSGEL CONSENSUS/80% htth.tsh.t.Y.t..sP.htplhp......lh.pspt....tp................ CONSENSUS/65% tpth.tuh.phYtp.csP.hsslhp......lltpsstt.h.ts................ CONSENSUS/50% RspFspALucMYpp.EVPtYusLl-......LVscsssphhtss.t.............. 220664.PFL_2235_from_48_to_447--QRLDLERHGAIRV----------GSAAELATLARLFAVMGMQPVGY--------YDL- CONSENSUS/80% ........cHhAhRs..........h.s.tlt.htphhhshGh..sG.........Yth. CONSENSUS/65% ........cHsAlRs..........ssshtLssltchFtshGhtssGh........Ych. CONSENSUS/50% ...RhthERHGAIRl..........GsstELusluRlFtshGMpPsGa........YDL. 220664.PFL_2235_from_48_to_447--TPAGVPVHSTAFRAVHEAAL-------QVSPFRVFTSLLRLE--LIDNPELRSFAEQV CONSENSUS/80% ....ssh.l.uhhac..............t.p..+lFhS.Lhh-................ CONSENSUS/65% ....suh.lhuptF+s.t.t.........shs..RlFhS.Ltl-................ CONSENSUS/50% ..s.uGhPl+uTsFRPssptsL.......stssFRVFsShL+lE..hh.s..hpt.stth 220664.PFL_2235_from_48_to_447LARRQIFTPQVLELIQQAEAA--------------GGLDAEDAERFIRQALETFRWHHHA CONSENSUS/80% ......hosph.thltth.tp..........................t.hhts...h... CONSENSUS/65% ......hosphhtllpphtpp....................pstthlsthlpsh..+pht CONSENSUS/50% ltpRplFoscstsLIcphpsp..............Guls.tpApphlspsLpsFch+sau 220664.PFL_2235_from_48_to_447TVTAAQYASLSAQHRLIADVVAFKGPHINHLTPRT------------LDIDEVQRLMPAR CONSENSUS/80% ..sht.YptL.ttpthhA.lhs..u.thNHhTsps.............slpthtthh.th CONSENSUS/65% slshspYppLtpppphhA.lss.pG.+lNHhTsps.............DI-tlppthtpt CONSENSUS/50% slshusYcpLpc-ScluADllu.cGsHlNHLTPRl............lDIDpVpctMpcc 220664.PFL_2235_from_48_to_447G----ITPKA---VIEGPPRRECP-ILLRQTSFKAL--------------------EESV CONSENSUS/80% G....h..pt....lcsssp.....hhLcQoShhA.....................t..h CONSENSUS/65% G....hshps...hIcGsPp.....hhL+QTShhA.....................ptsh CONSENSUS/50% G....hshKs...pIEGPPctt...lLLRQTSF+Al....................cEsl 220664.PFL_2235_from_48_to_447AFT-------DQAQSQ---GSHSARFGEIEQRGAALTPKGRELYDRLLNAAR-----DAL CONSENSUS/80% tF........ssttt......hsupahEhtpRh.h.p....................... CONSENSUS/65% tFt.......sssst......hsupFhEhtpRtsh.s.cth................... CONSENSUS/50% sFs.......-ussph....plsuRFGElEpRGsAhTs+G+thY-thhtph......... 220664.PFL_2235_from_48_to_447GDFPNEANAQRYNQLMQEHFREFPDSHPAMREQGLAYFRYFVSETGLAAR---------- CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ................t..htthPsp..tht.ttLsaa.h.................... 220664.PFL_2235_from_48_to_447------------------NQPQRPTTLAALLAAGHLSAEPLVYEDFLPVSAAGIFQSNL CONSENSUS/80% ..........................................hpsF.sssAstIFpSs. CONSENSUS/65% ..........................................Y-sFlssSAssIFpSsh CONSENSUS/50% .......................................slhYEDFLPsSAuGIFcSNL
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |