214684.CND06070_from_51_to_150PAHSWKYP---------WVLLTAAFVELGLINALVSAVALPLACRYLERVWG-------- CONSENSUS/80% Pth.h..s.........WshhTtshh-.phhthhhshhslhhhuphlE.hWu........ CONSENSUS/65% Pshhh..s.........WsllTusalEtslhpllhshhslhhsG+hlE.hWG........ CONSENSUS/50% PuthhhhP.........WTllTusFlEpslaslllshlsLhhuG+aLEshWG........ 214684.CND06070_from_51_to_150------ARELLRFCCITVVGSNLIAFGFSWIVWLLFGSEDA------------------- CONSENSUS/80% ......thEhhpFhhlhshhsslhhhhhhhhh.hhh.t.t.................... CONSENSUS/65% ......uhEhh+Flhllshhssllshhhhlhhhhhsts.phh.................. CONSENSUS/50% ......u+EhlKFlsllslloNllsslhhllhahlossschh.................. 214684.CND06070_from_51_to_150-------------------LYGLPYH-GMTGLQVG-----FLVAFTQ CONSENSUS/80% ........................ht.Ghhsh.hu.....hhlshpQ CONSENSUS/65% ......................h.ls.Ghhuhhhu.....hlVAhKQ CONSENSUS/50% .....................sssls.GshulhuG.....hLVAhKQ
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |